Team II Gene Prediction Group

Team 2: Gene Prediction

Team Members: Danielle Temples, Kara Lee​, Paarth Parekh, Shuting Lin

Introduction

Our Project

Purpose: Investigate an unknown outbreak pathogen using raw genome sequence data from the Centers for Disease Control and Prevention (CDC) foodborne illness surveillance outbreak investigations​

Overall Objective: Identify and characterize the pathogenic organism, make recommendations for the outbreak control, and build a public webserver that automates the computational steps​

Our Objective: From assembled genomes, predict genes or features using different prediction methods and evaluate selected tools on their accuracy and performance