Team III Webserver Group: Difference between revisions

From Compgenomics 2020
Jump to navigation Jump to search
Yuhua (talk | contribs)
Yuhua (talk | contribs)
Line 12: Line 12:


===='''Design Objectives'''====
===='''Design Objectives'''====
Users should be able to
* Go through the entire pipeline from genome assembly to comparative genomics
* Only execute individual steps
* Easily execute the remainder of the pipeline from any intermediate step


===='''Architecture Design'''====
===='''Architecture Design'''====

Revision as of 19:05, 18 April 2020

Team 3: Web Server

Group Members - Aparna Maddala, Sonali Gupta, Ahish Sujay, Yiqiong Xiao, Allison Rozanski, Yuhua Zhang

Introduction

Problem Statement

  • Makes our work as bioinformaticians accessible to a wider audience
  • Is easy-to-use, requires little bioinformatics knowledge to get the analysis results
  • Is visually informative, easy on eyes

Design Objectives

Users should be able to

  • Go through the entire pipeline from genome assembly to comparative genomics
  • Only execute individual steps
  • Easily execute the remainder of the pipeline from any intermediate step

Architecture Design

Approaches

MVC Framework - MODEL

MySQL

MVC Framework - View

Javascript, CSS, HTML

MVC Framework - Controller

Python(Flask)

Web server

Reverse Proxy

Functionality

Pipeline

Gene Prediction

Gene Prediction

Functional Annotation

Comparative Genomics

Webserver Walk through

References