Team I Genome Assembly Group: Difference between revisions

Revision as of 17:43, 29 January 2020

__Genome Assembly Workflow__

__Our Goals__ 1. To perform quality control on reads before and after assembling the genome. 2. To evaluate the performance of assembly tools:

  * Abyss
  * ALLPATHS-LG
  * SPADES
  * SKESA
  * Velvet

3. To use the best 2 to perform de novo assembly based on the 50 isolates. 4. To send off the highest quality result to gene prediction.

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 __Genome Assembly Workflow__
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-Image:workflow.png|<Center>'''Genome Assembly Workflow'''</center>
+Image:workflow.png|'''Genome Assembly Workflow'''
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