Team I Webserver Group: Difference between revisions
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=='''Method'''== | =='''Method'''== | ||
=='''Webserver Demo'''== | =='''Webserver Demo'''== | ||
*''' | *'''Choice One: Running General Pipline''' | ||
*'''Choice Two: Running each step separately''' | |||
=='''Results'''== | =='''Results'''== | ||
=='''Reference'''== | =='''Reference'''== | ||
Revision as of 04:58, 17 April 2020
Members: Devishi Kesar, Shuheng Gan, Winnie Zheng, Priya Narayanan, Aaron Pfennig
Introduction
Background
Objective
- Provide a comprehensive, automated platform to analyze E.coli isolates in order to predict virulence factors and outbreak cluster
- Functionalities of the webserver:
- Identify virulence factors/microbial resistance and outbreak response for provided isolates
- Allow data upload at each step of outline pipeline
- Visualize findings in a comprehensible way
- Design
- Intuitive usage
- Provide only essential options
WebServer
- Structure
- Access to Webserver
Here is Link to access our webserver:
Functionalities
Genome Assembly
Gene Prediction
Functional Annotation
Comparative Genomics
Method
Webserver Demo
- Choice One: Running General Pipline
- Choice Two: Running each step separately